Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SNX18-202ENST00000343017 3140 ntBASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 GHSR-202ENST00000427970 912 ntBASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 CYMP-203ENST00000474680 1263 ntBASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AL589739.1-201ENST00000607720 493 ntBASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC073592.8-201ENST00000624126 511 ntBASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIN7CQ9NUP9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 MIR943-201ENST00000401286 94 ntBASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SPDYE17-201ENST00000412399 783 ntBASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SERBP1P3-201ENST00000459980 809 ntBASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AL133215.2-201ENST00000609242 977 ntBASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AC093512.1-201ENST00000617969 520 ntBASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIN7CQ9NUP9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms