Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AC011270.2-201ENST00000624293 2550 ntBASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 LRRC59-203ENST00000576448 1531 ntBASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 USP32P1-208ENST00000506594 1164 ntBASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 AL603764.1-201ENST00000636452 321 ntBASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ECHDC1Q9NTX5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 SLC25A47P1-201ENST00000531577 414 ntBASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AC103702.1-201ENST00000548801 2630 ntBASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 AC055811.4-201ENST00000624039 1754 ntBASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ECHDC1Q9NTX5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms