Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 INE2-201ENST00000630399 1874 ntBASIC16.94■□□□□ 0.3
VTA1Q9NP79 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VTA1Q9NP79 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTA1Q9NP79 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AL162727.3-201ENST00000635661 2787 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 AC026691.1-201ENST00000602502 2017 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 RN7SKP230-201ENST00000365642 335 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 FAM58BP-201ENST00000439056 645 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 RN7SL11P-201ENST00000471305 293 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 DUX4L46-201ENST00000566845 751 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AC016629.1-201ENST00000596579 586 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AC068587.8-201ENST00000641239 219 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AC009093.2-202ENST00000620513 2079 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VTA1Q9NP79 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AL138725.1-201ENST00000407347 1314 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VTA1Q9NP79 AC092850.2-201ENST00000623821 2697 ntBASIC16.93■□□□□ 0.3
VTA1Q9NP79 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 Z97180.1-201ENST00000445173 988 ntBASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC104073.2-201ENST00000453737 312 ntBASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 RN7SL720P-201ENST00000488178 304 ntBASIC16.92■□□□□ 0.3
VTA1Q9NP79 MARK2P5-201ENST00000507649 634 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms