Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 TMEM14DP-201ENST00000422205 345 ntBASIC16.18■□□□□ 0.18
CD248Q9HCU0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 RARRES2P5-201ENST00000564013 466 ntBASIC16.18■□□□□ 0.18
CD248Q9HCU0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 AL691432.1-201ENST00000596308 1422 ntBASIC16.18■□□□□ 0.18
CD248Q9HCU0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD248Q9HCU0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CD248Q9HCU0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 KRT17P8-201ENST00000540749 863 ntBASIC16.17■□□□□ 0.18
CD248Q9HCU0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 AL390755.1-201ENST00000623716 2027 ntBASIC16.17■□□□□ 0.18
CD248Q9HCU0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD248Q9HCU0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CD248Q9HCU0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CD248Q9HCU0 AL592424.1-201ENST00000563624 1536 ntBASIC16.16■□□□□ 0.18
CD248Q9HCU0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 MIR1909-201ENST00000411312 80 ntBASIC16.16■□□□□ 0.18
CD248Q9HCU0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.16■□□□□ 0.18
CD248Q9HCU0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms