Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 AL591846.1-201ENST00000451736 433 ntBASIC16.41■□□□□ 0.22
NXF3Q9H4D5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 AL118558.3-201ENST00000607414 1079 ntBASIC16.41■□□□□ 0.22
NXF3Q9H4D5 AL096828.3-201ENST00000615354 462 ntBASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NXF3Q9H4D5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AC126365.1-201ENST00000578585 1514 ntBASIC16.4■□□□□ 0.22
NXF3Q9H4D5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 MESTP3-201ENST00000503460 968 ntBASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AC244093.1-201ENST00000610837 814 ntBASIC16.4■□□□□ 0.22
NXF3Q9H4D5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 REXO1L2P-201ENST00000425429 2069 ntBASIC16.4■□□□□ 0.22
NXF3Q9H4D5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.4■□□□□ 0.22
NXF3Q9H4D5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NXF3Q9H4D5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NXF3Q9H4D5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NXF3Q9H4D5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
NXF3Q9H4D5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.39■□□□□ 0.21
NXF3Q9H4D5 AC104306.2-201ENST00000451877 341 ntBASIC16.39■□□□□ 0.21
NXF3Q9H4D5 FTLP10-202ENST00000505798 471 ntBASIC16.39■□□□□ 0.21
NXF3Q9H4D5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms