Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 ISCA2P1-201ENST00000425548 448 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 PDIA3P2-201ENST00000428073 158 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 AC019193.1-201ENST00000506678 823 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 AC073352.2-201ENST00000609385 439 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 AC002472.3-201ENST00000640124 621 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 REXO1L5P-201ENST00000622260 2098 ntBASIC16.58■□□□□ 0.24
HIPK3Q9H422 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK3Q9H422 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 LINC00554-201ENST00000564841 3011 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 AC127383.1-201ENST00000444697 1800 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 MTHFR-217ENST00000641820 1569 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 RN7SKP214-201ENST00000364208 315 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 FGFR3P1-201ENST00000449999 601 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 RPL18P13-201ENST00000478088 569 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 AC026434.2-201ENST00000506094 1078 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 AL160314.3-201ENST00000556041 767 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 COX6A1P2-201ENST00000620597 330 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 AC006453.1-201ENST00000636037 1257 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 NAP1L6-202ENST00000641404 1222 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIPK3Q9H422 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 LINC02447-202ENST00000501888 2146 ntBASIC16.57■□□□□ 0.24
HIPK3Q9H422 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.57■□□□□ 0.24
HIPK3Q9H422 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.56■□□□□ 0.24
HIPK3Q9H422 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.56■□□□□ 0.24
HIPK3Q9H422 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIPK3Q9H422 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms