Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.83■□□□□ 0.12
FOXP3Q9BZS1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AL133267.1-201ENST00000398220 340 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 RN7SL692P-201ENST00000464677 288 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AC105021.1-202ENST00000570572 669 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 SPDYE22P-201ENST00000582158 798 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AL589739.1-201ENST00000607720 493 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 AC113367.3-201ENST00000508316 1912 ntBASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXP3Q9BZS1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AL035456.1-201ENST00000456064 1369 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms