Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 MTND4LP12-201ENST00000448237 295 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 RPSAP36-202ENST00000494591 1261 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC026434.2-201ENST00000506094 1078 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 FAM8A2P-201ENST00000528813 1142 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC005730.2-201ENST00000564549 1184 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC009712.1-201ENST00000564938 316 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SAMD11P1-201ENST00000571429 661 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 OR10B1P-201ENST00000601666 907 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL021578.1-201ENST00000613646 709 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC005695.3-201ENST00000614522 232 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 REXO1L4P-201ENST00000605109 1937 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC055811.4-201ENST00000624039 1754 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AC013726.1-201ENST00000563747 2285 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL162727.3-201ENST00000635661 2787 ntBASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP4-3Q9BYR4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC020658.6-201ENST00000623564 1870 ntBASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP4-3Q9BYR4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms