Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VRK1Q99986 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 AL691432.1-201ENST00000596308 1422 ntBASIC13.62□□□□□ -0.23
VRK1Q99986 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK1Q99986 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.62□□□□□ -0.23
VRK1Q99986 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK1Q99986 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
VRK1Q99986 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 AL391825.1-201ENST00000457671 1364 ntBASIC13.61□□□□□ -0.23
VRK1Q99986 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 AC244107.1-201ENST00000442033 332 ntBASIC13.61□□□□□ -0.23
VRK1Q99986 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 GAPDHP21-201ENST00000450301 1010 ntBASIC13.61□□□□□ -0.23
VRK1Q99986 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.61□□□□□ -0.23
VRK1Q99986 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.61□□□□□ -0.23
VRK1Q99986 API5-211ENST00000534695 560 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
VRK1Q99986 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 SRD5A3P1-201ENST00000603021 949 ntBASIC13.61□□□□□ -0.23
VRK1Q99986 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK1Q99986 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.61□□□□□ -0.23
VRK1Q99986 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 ST20-AS1-201ENST00000560255 4223 ntBASIC13.61□□□□□ -0.23
VRK1Q99986 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.61□□□□□ -0.23
VRK1Q99986 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK1Q99986 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VRK1Q99986 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VRK1Q99986 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VRK1Q99986 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
VRK1Q99986 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
VRK1Q99986 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.6□□□□□ -0.23
VRK1Q99986 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.6□□□□□ -0.23
VRK1Q99986 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.6□□□□□ -0.23
VRK1Q99986 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK1Q99986 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms