Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.69□□□□□ -0.38
S1PR3Q99500 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.69□□□□□ -0.38
S1PR3Q99500 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.69□□□□□ -0.38
S1PR3Q99500 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 AL390754.1-201ENST00000619088 582 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 AL590560.3-201ENST00000623350 461 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 AC138969.3-201ENST00000546612 1459 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 AC138932.2-201ENST00000548268 1459 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 AC126755.4-201ENST00000549796 1459 ntBASIC12.69□□□□□ -0.38
S1PR3Q99500 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.69□□□□□ -0.38
S1PR3Q99500 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
S1PR3Q99500 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
S1PR3Q99500 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
S1PR3Q99500 CICP23-201ENST00000605013 2741 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.68□□□□□ -0.38
S1PR3Q99500 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 AC106881.1-201ENST00000605849 3329 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 AC007686.3-201ENST00000619017 3487 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.68□□□□□ -0.38
S1PR3Q99500 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 TOMM22P5-201ENST00000416399 439 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 AC074338.1-201ENST00000416825 156 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 BASP1P1-201ENST00000430708 665 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AL512638.1-201ENST00000457493 794 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AL512361.1-201ENST00000554200 418 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AC010336.2-201ENST00000564226 506 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.68□□□□□ -0.38
S1PR3Q99500 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 AL109936.8-201ENST00000641772 604 ntBASIC12.68□□□□□ -0.38
S1PR3Q99500 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.68□□□□□ -0.38
S1PR3Q99500 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
S1PR3Q99500 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
S1PR3Q99500 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
S1PR3Q99500 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.68□□□□□ -0.38
S1PR3Q99500 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.68□□□□□ -0.38
S1PR3Q99500 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms