Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMCN1Q96RW7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 UBALD1-205ENST00000590891 2641 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC103563.1-201ENST00000429316 123 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 HLA-K-203ENST00000430151 1046 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 OR2R1P-201ENST00000441404 914 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 RN7SL477P-201ENST00000488440 286 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TPI1P2-201ENST00000491343 752 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 OR52P2P-201ENST00000527287 955 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL031768.1-201ENST00000606542 701 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC006058.4-201ENST00000624016 1670 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC138028.4-201ENST00000564984 1845 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 RN7SKP230-201ENST00000365642 335 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 MIR645-201ENST00000385283 94 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC253536.1-201ENST00000437021 315 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 PRDX3P2-201ENST00000447051 611 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC069421.1-201ENST00000447462 323 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC007690.1-201ENST00000451924 468 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC103724.2-201ENST00000520355 476 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 RN7SL460P-201ENST00000582806 258 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC007250.1-201ENST00000608934 338 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC012186.3-201ENST00000623850 485 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 FKBP4P7-201ENST00000433874 1363 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL157414.3-201ENST00000624276 1954 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LINC02012-201ENST00000608206 1725 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC007952.5-201ENST00000572818 1486 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SSR3-202ENST00000463503 596 ntTSL 4 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC087203.1-201ENST00000532111 1181 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 AL022334.2-201ENST00000610000 484 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LINC00244-201ENST00000625073 613 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC4.45□□□□□ -1.7
HMCN1Q96RW7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMCN1Q96RW7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms