Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 GK-202ENST00000378941 458 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 ACTBP8-201ENST00000403258 1108 ntBASIC15.75■□□□□ 0.11
RPRD1AQ96P16 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 HILS1-202ENST00000545329 423 ntBASIC15.75■□□□□ 0.11
RPRD1AQ96P16 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 AL157414.3-201ENST00000624276 1954 ntBASIC15.75■□□□□ 0.11
RPRD1AQ96P16 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPRD1AQ96P16 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 AC092384.3-202ENST00000564646 2873 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 REXO1L5P-201ENST00000622260 2098 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 OR8S1-201ENST00000310194 1080 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 CROCCP4-201ENST00000457096 498 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 KRT8P14-201ENST00000414254 1442 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.74■□□□□ 0.11
RPRD1AQ96P16 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.74■□□□□ 0.11
RPRD1AQ96P16 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 AL360270.3-201ENST00000609118 1348 ntBASIC15.73■□□□□ 0.11
RPRD1AQ96P16 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RPRD1AQ96P16 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms