Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CNN2P2-201ENST00000443536 909 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CNN2P3-201ENST00000450201 906 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 HLA-J-203ENST00000494367 1087 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC004066.1-201ENST00000502488 802 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC027612.4-201ENST00000605371 583 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AL136317.3-201ENST00000618497 906 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AL360270.3-201ENST00000609118 1348 ntBASIC11.09□□□□□ -0.63
C9orf85Q96MD7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 AP000347.1-202ENST00000435868 847 ntBASIC11.09□□□□□ -0.63
C9orf85Q96MD7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 ZNF890P-202ENST00000530367 1156 ntBASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.09□□□□□ -0.63
C9orf85Q96MD7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms