Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC079781.5-202ENST00000641784 3743 ntBASIC13.9□□□□□ -0.18
LRRC46Q96FV0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.9□□□□□ -0.18
LRRC46Q96FV0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC018665.1-201ENST00000622927 1362 ntBASIC13.9□□□□□ -0.18
LRRC46Q96FV0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 AC015656.1-201ENST00000624209 3578 ntBASIC13.9□□□□□ -0.18
LRRC46Q96FV0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRC46Q96FV0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LRRC46Q96FV0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.9□□□□□ -0.19
LRRC46Q96FV0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 OR2I1P-210ENST00000642037 4691 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TOMM22P5-201ENST00000416399 439 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 RPL13P2-201ENST00000440687 659 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 PHKG1P2-201ENST00000457537 863 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 SLC25A47P1-201ENST00000531577 414 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 AL450472.2-201ENST00000603663 1156 ntBASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRC46Q96FV0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 INTS4P2-202ENST00000614726 2019 ntBASIC13.88□□□□□ -0.19
LRRC46Q96FV0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC46Q96FV0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms