Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC105206.1-202ENST00000314927 2368 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AC009947.1-201ENST00000444350 727 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AL450472.2-201ENST00000603663 1156 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 AC012313.10-201ENST00000623509 926 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 MST1P2-201ENST00000457982 2291 ntBASIC13.3□□□□□ -0.28
BEST4Q8NFU0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BEST4Q8NFU0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 AC004899.2-201ENST00000622993 3860 ntBASIC13.29□□□□□ -0.28
BEST4Q8NFU0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SPTSSB-204ENST00000617024 1292 ntBASIC13.29□□□□□ -0.28
BEST4Q8NFU0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.29□□□□□ -0.28
BEST4Q8NFU0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AC019294.4-201ENST00000561777 2905 ntBASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AL731571.1-201ENST00000617058 5428 ntBASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms