Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AC007787.1-201ENST00000588095 1583 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP43Q8NFH3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 VDAC1P7-201ENST00000462417 847 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC093004.1-201ENST00000508850 424 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC026410.3-201ENST00000514280 936 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC055876.2-201ENST00000531834 546 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC107373.2-201ENST00000607735 490 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AC009118.2-201ENST00000613275 655 ntBASIC14.33□□□□□ -0.12
NUP43Q8NFH3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP43Q8NFH3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 RPL13AP25-201ENST00000484130 612 ntBASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms