Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 AC078875.1-201ENST00000431907 724 ntBASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 AC026803.1-201ENST00000569130 274 ntBASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 AL109954.1-202ENST00000564051 2148 ntBASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 E2F3P2-201ENST00000447755 1422 ntBASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC23.28■■□□□ 1.32
CFAP43Q8NDM7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 AC005618.3-201ENST00000624928 458 ntBASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CFAP43Q8NDM7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.31
CFAP43Q8NDM7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC23.27■■□□□ 1.31
CFAP43Q8NDM7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AC130709.1-201ENST00000484779 1212 ntBASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AL109837.1-201ENST00000603272 613 ntBASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 MIR6858-201ENST00000620733 67 ntBASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 AC006058.4-201ENST00000624016 1670 ntBASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 MBLAC2-202ENST00000514906 1936 ntBASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CFAP43Q8NDM7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 FAM90A2P-201ENST00000511144 1395 ntBASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 FAM90A25P-201ENST00000528404 1395 ntBASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms