Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 KRT18P64-201ENST00000434946 1219 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 AL079307.3-201ENST00000556114 283 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 AL589739.1-201ENST00000607720 493 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 MIR6069-201ENST00000620069 79 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 MTHFR-210ENST00000641407 2387 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 AC126335.2-201ENST00000623362 4637 ntBASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL1Q8N7R7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 DNAJB3-201ENST00000446806 729 ntBASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AC015910.1-201ENST00000579400 975 ntBASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCNYL1Q8N7R7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCNYL1Q8N7R7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms