Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 RNMTL1P1-201ENST00000454103 560 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 MIR3907-201ENST00000579424 151 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 MIR5572-201ENST00000583188 137 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AC055811.4-201ENST00000624039 1754 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 AC008132.1-202ENST00000342005 1389 ntBASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEFF1Q8IYR6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 MIR33B-201ENST00000385104 96 ntBASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AC011742.3-201ENST00000439053 820 ntBASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AL645939.5-201ENST00000606834 243 ntBASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 AL353726.2-201ENST00000623259 884 ntBASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEFF1Q8IYR6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms