Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL359881.3-201ENST00000602640 1721 ntBASIC13.7□□□□□ -0.22
LRRC28Q86X40 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRC28Q86X40 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRC28Q86X40 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 KLF2P3-201ENST00000451977 1087 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 AC243562.2-201ENST00000561247 970 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 AC024267.1-201ENST00000582320 895 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 MIR4453-201ENST00000584019 89 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 AC092135.3-201ENST00000624151 1846 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 ACE3P-201ENST00000423435 1973 ntBASIC13.69□□□□□ -0.22
LRRC28Q86X40 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC28Q86X40 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRRC28Q86X40 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC079781.5-202ENST00000641784 3743 ntBASIC13.68□□□□□ -0.22
LRRC28Q86X40 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms