Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AC092933.1-201ENST00000393644 945 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AC004066.1-201ENST00000502488 802 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 KRT18P25-201ENST00000508931 1278 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AP005482.1-201ENST00000563722 1273 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 AC005089.1-201ENST00000619486 2241 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 MSTO2P-201ENST00000314835 1709 ntBASIC16.28■□□□□ 0.2
VSTM1Q6UX27 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSTM1Q6UX27 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 C18orf15-201ENST00000623680 2534 ntBASIC16.27■□□□□ 0.2
VSTM1Q6UX27 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AC093525.8-201ENST00000624099 1342 ntBASIC16.27■□□□□ 0.2
VSTM1Q6UX27 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AL359258.3-201ENST00000622910 2331 ntBASIC16.27■□□□□ 0.2
VSTM1Q6UX27 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AL645937.2-201ENST00000396808 931 ntBASIC16.27■□□□□ 0.2
VSTM1Q6UX27 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 CROCCP4-201ENST00000457096 498 ntBASIC16.27■□□□□ 0.2
VSTM1Q6UX27 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VSTM1Q6UX27 AC007191.1-201ENST00000623179 2995 ntBASIC16.27■□□□□ 0.19
VSTM1Q6UX27 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VSTM1Q6UX27 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VSTM1Q6UX27 MIR658-201ENST00000385210 100 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms