Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AC074338.1-201ENST00000416825 156 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 SPDYE7P-202ENST00000420373 878 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 SERBP1P3-201ENST00000459980 809 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 MIR3687-2-201ENST00000577708 61 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AL671883.3-201ENST00000603274 991 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AL589739.1-201ENST00000607720 493 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 MIR3687-1-201ENST00000614492 61 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 Z97205.2-201ENST00000564697 1639 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 CETN4P-206ENST00000642099 2168 ntBASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMARCD3Q6STE5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 CICP4-201ENST00000447359 2812 ntBASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SMARCD3Q6STE5 AL133267.1-201ENST00000398220 340 ntBASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AC023141.5-201ENST00000458585 616 ntBASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 AP000845.1-201ENST00000581677 2131 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms