Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AC097493.3-201ENST00000509725 367 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ALG1L8P-201ENST00000533887 760 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AC027307.2-201ENST00000591252 911 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AP001267.2-201ENST00000532619 2086 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AL353732.1-201ENST00000569618 1459 ntBASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 LINC01225-203ENST00000563550 1244 ntBASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 MIR4453-201ENST00000584019 89 ntBASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AL031055.1-201ENST00000606362 631 ntBASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 AC083964.2-201ENST00000623988 2396 ntBASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXR1Q6PIV2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 AL158211.3-201ENST00000607385 239 ntBASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms