Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC004967.1-201ENST00000453589 447 ntBASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC125807.1-201ENST00000483097 614 ntBASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC069120.2-201ENST00000524091 540 ntBASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AL596442.2-201ENST00000610240 980 ntBASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.29□□□□□ -0.12
REEP3Q6NUK4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
REEP3Q6NUK4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TSEN15P1-201ENST00000423257 515 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 LILRP1-201ENST00000444199 1370 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC087499.5-201ENST00000452760 1342 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC027369.6-201ENST00000525520 931 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC025678.2-201ENST00000562061 970 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 AC004461.2-201ENST00000629517 803 ntBASIC14.28□□□□□ -0.12
REEP3Q6NUK4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
REEP3Q6NUK4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms