Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 MRPL20P1-201ENST00000400819 433 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 AC136632.2-201ENST00000512891 861 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 AC107918.4-202ENST00000641623 219 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 KRT8P37-201ENST00000451609 1420 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 KRT8P24-201ENST00000560290 1559 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 AL607033.1-201ENST00000623900 1599 ntBASIC16.26■□□□□ 0.19
ERCC6LQ2NKX8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AC092474.2-201ENST00000424288 719 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 RPS8P6-201ENST00000426177 609 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AL513480.1-201ENST00000451731 511 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 TMEM198B-204ENST00000484016 896 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 CXCL1P1-201ENST00000502804 216 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AC091304.2-201ENST00000564639 760 ntBASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC6LQ2NKX8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms