Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.33■□□□□ 0.53
RFX7Q2KHR2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.33■□□□□ 0.52
RFX7Q2KHR2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.33■□□□□ 0.52
RFX7Q2KHR2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CD8B2-202ENST00000417670 633 ntBASIC18.32■□□□□ 0.52
RFX7Q2KHR2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.32■□□□□ 0.52
RFX7Q2KHR2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFX7Q2KHR2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 MIR326-201ENST00000362220 95 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AC006033.1-201ENST00000440505 426 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AP003171.2-201ENST00000528208 925 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AC023310.1-201ENST00000554836 735 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AC243960.2-201ENST00000600996 747 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AC132938.4-201ENST00000623835 848 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 AHCYP2-201ENST00000430630 1300 ntBASIC18.31■□□□□ 0.52
RFX7Q2KHR2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX7Q2KHR2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms