Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.86□□□□□ -0.19
SLC3A1Q07837 RNA5SP410-201ENST00000516285 106 ntBASIC13.86□□□□□ -0.19
SLC3A1Q07837 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 SLC25A39P2-201ENST00000537614 270 ntBASIC13.86□□□□□ -0.19
SLC3A1Q07837 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AC093028.1-201ENST00000622998 982 ntBASIC13.86□□□□□ -0.19
SLC3A1Q07837 KRT8P37-201ENST00000451609 1420 ntBASIC13.86□□□□□ -0.19
SLC3A1Q07837 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC3A1Q07837 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC3A1Q07837 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 RFPL4AP1-201ENST00000530883 850 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 ALG1L8P-201ENST00000533887 760 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 AC069262.1-201ENST00000539058 672 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 AC027796.2-201ENST00000575326 344 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CICP11-201ENST00000434745 2827 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC3A1Q07837 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC3A1Q07837 FOXO1B-201ENST00000504678 1527 ntBASIC13.85□□□□□ -0.19
SLC3A1Q07837 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 WASH3P-207ENST00000560956 1394 ntBASIC13.84□□□□□ -0.19
SLC3A1Q07837 FO538757.1-201ENST00000623083 1397 ntBASIC13.84□□□□□ -0.19
SLC3A1Q07837 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC3A1Q07837 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC3A1Q07837 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC3A1Q07837 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SLC3A1Q07837 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC3A1Q07837 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms