Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX3P78415 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.85■□□□□ 0.45
IRX3P78415 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.85■□□□□ 0.45
IRX3P78415 SCARNA20.5-201ENST00000516991 142 ntBASIC17.85■□□□□ 0.45
IRX3P78415 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.85■□□□□ 0.45
IRX3P78415 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
IRX3P78415 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
IRX3P78415 LRRC59-203ENST00000576448 1531 ntBASIC17.85■□□□□ 0.45
IRX3P78415 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.85■□□□□ 0.45
IRX3P78415 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
IRX3P78415 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
IRX3P78415 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IRX3P78415 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.84■□□□□ 0.45
IRX3P78415 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.84■□□□□ 0.45
IRX3P78415 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.84■□□□□ 0.45
IRX3P78415 AKR7A2P1-201ENST00000460134 915 ntBASIC17.84■□□□□ 0.45
IRX3P78415 AC091804.1-201ENST00000486888 567 ntBASIC17.84■□□□□ 0.45
IRX3P78415 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 RHOQP1-201ENST00000555758 579 ntBASIC17.84■□□□□ 0.45
IRX3P78415 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.84■□□□□ 0.45
IRX3P78415 AL096828.3-201ENST00000615354 462 ntBASIC17.84■□□□□ 0.45
IRX3P78415 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
IRX3P78415 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IRX3P78415 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.84■□□□□ 0.45
IRX3P78415 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.83■□□□□ 0.45
IRX3P78415 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.83■□□□□ 0.45
IRX3P78415 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.83■□□□□ 0.45
IRX3P78415 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.83■□□□□ 0.45
IRX3P78415 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.83■□□□□ 0.45
IRX3P78415 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
IRX3P78415 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.83■□□□□ 0.45
IRX3P78415 AL009178.2-201ENST00000597278 2719 ntBASIC17.83■□□□□ 0.45
IRX3P78415 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IRX3P78415 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
IRX3P78415 AL596087.1-201ENST00000400979 1969 ntBASIC17.83■□□□□ 0.44
IRX3P78415 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
IRX3P78415 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.83■□□□□ 0.44
IRX3P78415 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.83■□□□□ 0.44
IRX3P78415 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.83■□□□□ 0.44
IRX3P78415 AC020914.3-201ENST00000594712 304 ntBASIC17.83■□□□□ 0.44
IRX3P78415 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.83■□□□□ 0.44
IRX3P78415 AL021578.1-201ENST00000613646 709 ntBASIC17.83■□□□□ 0.44
IRX3P78415 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
IRX3P78415 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
IRX3P78415 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms