Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRA2BP62995 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 ACKR1-201ENST00000368121 1240 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRA2BP62995 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.41□□□□□ -0.1
TRA2BP62995 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.41□□□□□ -0.1
TRA2BP62995 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRA2BP62995 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.41□□□□□ -0.1
TRA2BP62995 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.41□□□□□ -0.1
TRA2BP62995 DUX4L47-201ENST00000566374 394 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 SPDYE22P-201ENST00000582158 798 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 CHCHD2P3-201ENST00000603038 451 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRA2BP62995 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.41□□□□□ -0.1
TRA2BP62995 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.41□□□□□ -0.1
TRA2BP62995 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.41□□□□□ -0.1
TRA2BP62995 AL157414.3-201ENST00000624276 1954 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 REXO1L5P-201ENST00000622260 2098 ntBASIC14.41□□□□□ -0.1
TRA2BP62995 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.41□□□□□ -0.1
TRA2BP62995 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.41□□□□□ -0.1
TRA2BP62995 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRA2BP62995 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.41□□□□□ -0.1
TRA2BP62995 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TRA2BP62995 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 AC018442.1-201ENST00000421439 2061 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRA2BP62995 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRA2BP62995 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRA2BP62995 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.4□□□□□ -0.1
TRA2BP62995 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRA2BP62995 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 AC098850.1-201ENST00000419919 790 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 AC002472.2-201ENST00000442739 958 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.4□□□□□ -0.1
TRA2BP62995 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.4□□□□□ -0.1
TRA2BP62995 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.4□□□□□ -0.1
TRA2BP62995 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 AC022616.1-201ENST00000518688 554 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 AP001582.1-201ENST00000525856 295 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.4□□□□□ -0.1
TRA2BP62995 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
TRA2BP62995 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRA2BP62995 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRA2BP62995 AP005019.2-201ENST00000615104 511 ntBASIC14.4□□□□□ -0.1
TRA2BP62995 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TRA2BP62995 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
TRA2BP62995 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.4□□□□□ -0.1
TRA2BP62995 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRA2BP62995 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.4□□□□□ -0.11
TRA2BP62995 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRA2BP62995 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRA2BP62995 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRA2BP62995 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.39□□□□□ -0.11
TRA2BP62995 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms