Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 AC136621.1-201ENST00000624017 2304 ntBASIC17.56■□□□□ 0.4
CHMP4BP1P59074 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP4BP1P59074 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.55■□□□□ 0.4
CHMP4BP1P59074 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 AC099336.1-201ENST00000417053 1171 ntBASIC17.55■□□□□ 0.4
CHMP4BP1P59074 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 AC124283.3-201ENST00000570869 594 ntBASIC17.55■□□□□ 0.4
CHMP4BP1P59074 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP4BP1P59074 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AC134312.5-201ENST00000568031 1313 ntBASIC17.54■□□□□ 0.4
CHMP4BP1P59074 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AP001889.1-201ENST00000525414 633 ntBASIC17.54■□□□□ 0.4
CHMP4BP1P59074 HNRNPUP1-201ENST00000554987 333 ntBASIC17.54■□□□□ 0.4
CHMP4BP1P59074 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 AC138035.3-201ENST00000622706 2791 ntBASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP4BP1P59074 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP4BP1P59074 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP4BP1P59074 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHMP4BP1P59074 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP4BP1P59074 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms