Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 MIR1908-201ENST00000410394 80 ntBASIC14.27□□□□□ -0.13
PER3P56645 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.27□□□□□ -0.13
PER3P56645 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.27□□□□□ -0.13
PER3P56645 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.27□□□□□ -0.13
PER3P56645 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.27□□□□□ -0.13
PER3P56645 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.27□□□□□ -0.13
PER3P56645 TDH-203ENST00000531764 1110 ntBASIC14.27□□□□□ -0.13
PER3P56645 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.27□□□□□ -0.13
PER3P56645 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.27□□□□□ -0.13
PER3P56645 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
PER3P56645 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PER3P56645 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PER3P56645 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PER3P56645 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PER3P56645 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PER3P56645 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PER3P56645 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 AC106881.1-201ENST00000605849 3329 ntBASIC14.26□□□□□ -0.13
PER3P56645 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PER3P56645 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 AC004987.2-201ENST00000395959 1148 ntBASIC14.26□□□□□ -0.13
PER3P56645 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 ACTG1P3-201ENST00000431775 1114 ntBASIC14.26□□□□□ -0.13
PER3P56645 AL355864.2-201ENST00000447420 863 ntBASIC14.26□□□□□ -0.13
PER3P56645 AC245100.5-201ENST00000452108 331 ntBASIC14.26□□□□□ -0.13
PER3P56645 RN7SL399P-201ENST00000471648 279 ntBASIC14.26□□□□□ -0.13
PER3P56645 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 PTP4A1P2-201ENST00000546033 454 ntBASIC14.26□□□□□ -0.13
PER3P56645 AC079316.1-201ENST00000548397 411 ntBASIC14.26□□□□□ -0.13
PER3P56645 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.26□□□□□ -0.13
PER3P56645 AC025048.3-201ENST00000590609 569 ntBASIC14.26□□□□□ -0.13
PER3P56645 AC244093.1-201ENST00000610837 814 ntBASIC14.26□□□□□ -0.13
PER3P56645 AC005702.4-201ENST00000618393 416 ntBASIC14.26□□□□□ -0.13
PER3P56645 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.26□□□□□ -0.13
PER3P56645 REXO1L8P-201ENST00000604378 1897 ntBASIC14.26□□□□□ -0.13
PER3P56645 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.26□□□□□ -0.13
PER3P56645 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PER3P56645 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PER3P56645 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms