Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 AL136309.1-201ENST00000403917 691 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHB3P54753 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHB3P54753 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 AC091804.1-201ENST00000486888 567 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.88■□□□□ 0.13
EPHB3P54753 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
EPHB3P54753 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHB3P54753 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.88■□□□□ 0.13
EPHB3P54753 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.88■□□□□ 0.13
EPHB3P54753 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.88■□□□□ 0.13
EPHB3P54753 AC020914.3-201ENST00000594712 304 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 AC004466.1-201ENST00000599515 1080 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 AL606495.2-201ENST00000605867 535 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.88■□□□□ 0.13
EPHB3P54753 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
EPHB3P54753 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
EPHB3P54753 FKBP4P6-201ENST00000457486 1332 ntBASIC15.88■□□□□ 0.13
EPHB3P54753 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHB3P54753 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHB3P54753 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 MST1L-201ENST00000442552 2185 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.87■□□□□ 0.13
EPHB3P54753 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.87■□□□□ 0.13
EPHB3P54753 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
EPHB3P54753 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
EPHB3P54753 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 CALR4P-201ENST00000431943 946 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 AKR7A2P1-201ENST00000460134 915 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.87■□□□□ 0.13
EPHB3P54753 SCARNA20.5-201ENST00000516991 142 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 AC126915.1-201ENST00000522847 1038 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 AP003171.2-201ENST00000528208 925 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
EPHB3P54753 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.87■□□□□ 0.13
EPHB3P54753 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.87■□□□□ 0.13
EPHB3P54753 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
EPHB3P54753 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.87■□□□□ 0.13
EPHB3P54753 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
EPHB3P54753 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHB3P54753 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHB3P54753 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.87■□□□□ 0.13
EPHB3P54753 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 AC087481.3-201ENST00000602886 1894 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 AC138028.6-201ENST00000616106 1482 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms