Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE1AP54750 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PDE1AP54750 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE1AP54750 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.63■□□□□ 0.57
PDE1AP54750 DUX4L47-201ENST00000566374 394 ntBASIC18.63■□□□□ 0.57
PDE1AP54750 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE1AP54750 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDE1AP54750 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
PDE1AP54750 FAM45BP-202ENST00000592932 1624 ntBASIC18.63■□□□□ 0.57
PDE1AP54750 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDE1AP54750 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE1AP54750 AC007292.2-201ENST00000593524 1812 ntBASIC18.63■□□□□ 0.57
PDE1AP54750 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 AC007686.3-201ENST00000619017 3487 ntBASIC18.62■□□□□ 0.57
PDE1AP54750 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 DGCR5-201ENST00000399539 862 ntBASIC18.62■□□□□ 0.57
PDE1AP54750 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE1AP54750 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.62■□□□□ 0.57
PDE1AP54750 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE1AP54750 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE1AP54750 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE1AP54750 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE1AP54750 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE1AP54750 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE1AP54750 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PDE1AP54750 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE1AP54750 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE1AP54750 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE1AP54750 KLF2P2-201ENST00000416807 1039 ntBASIC18.61■□□□□ 0.57
PDE1AP54750 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.61■□□□□ 0.57
PDE1AP54750 CRB3P1-201ENST00000449338 276 ntBASIC18.61■□□□□ 0.57
PDE1AP54750 ENPP7P5-201ENST00000541031 1031 ntBASIC18.61■□□□□ 0.57
PDE1AP54750 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 AC140479.7-201ENST00000636301 2332 ntBASIC18.61■□□□□ 0.57
PDE1AP54750 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE1AP54750 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE1AP54750 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDE1AP54750 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDE1AP54750 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDE1AP54750 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE1AP54750 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE1AP54750 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.6■□□□□ 0.57
PDE1AP54750 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.6■□□□□ 0.57
PDE1AP54750 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms