Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.61□□□□□ -0.23
LHX2P50458 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.61□□□□□ -0.23
LHX2P50458 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
LHX2P50458 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LHX2P50458 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
LHX2P50458 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LHX2P50458 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 AL354989.2-201ENST00000435838 1540 ntBASIC13.6□□□□□ -0.23
LHX2P50458 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LHX2P50458 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.6□□□□□ -0.23
LHX2P50458 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.6□□□□□ -0.23
LHX2P50458 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 AC004466.1-201ENST00000599515 1080 ntBASIC13.6□□□□□ -0.23
LHX2P50458 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 AC138035.3-201ENST00000622706 2791 ntBASIC13.6□□□□□ -0.23
LHX2P50458 AC022532.1-201ENST00000624563 1728 ntBASIC13.6□□□□□ -0.23
LHX2P50458 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.6□□□□□ -0.23
LHX2P50458 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
LHX2P50458 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LHX2P50458 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 LILRP1-201ENST00000444199 1370 ntBASIC13.59□□□□□ -0.23
LHX2P50458 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.59□□□□□ -0.23
LHX2P50458 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
LHX2P50458 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.59□□□□□ -0.23
LHX2P50458 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 AC010328.2-201ENST00000597698 1111 ntBASIC13.59□□□□□ -0.23
LHX2P50458 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.59□□□□□ -0.23
LHX2P50458 TUBB1P2-201ENST00000422712 1306 ntBASIC13.59□□□□□ -0.23
LHX2P50458 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 TUBB1P1-201ENST00000503144 1300 ntBASIC13.59□□□□□ -0.23
LHX2P50458 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LHX2P50458 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.59□□□□□ -0.23
LHX2P50458 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms