Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
PSEN1P49768 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.48■□□□□ 0.23
PSEN1P49768 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
PSEN1P49768 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSEN1P49768 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PSEN1P49768 AC041040.2-201ENST00000622926 2899 ntBASIC16.48■□□□□ 0.23
PSEN1P49768 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
PSEN1P49768 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PSEN1P49768 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PSEN1P49768 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.47■□□□□ 0.23
PSEN1P49768 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PSEN1P49768 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC16.47■□□□□ 0.23
PSEN1P49768 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.47■□□□□ 0.23
PSEN1P49768 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 RN7SL399P-201ENST00000471648 279 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.47■□□□□ 0.23
PSEN1P49768 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC16.47■□□□□ 0.23
PSEN1P49768 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.47■□□□□ 0.23
PSEN1P49768 AC005225.4-201ENST00000557330 545 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 MIR4313-201ENST00000580760 101 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 BNIP3P39-201ENST00000601077 554 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 CHCHD2P3-201ENST00000603038 451 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.47■□□□□ 0.23
PSEN1P49768 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.47■□□□□ 0.23
PSEN1P49768 AL162390.1-201ENST00000622201 1246 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 AC007431.3-201ENST00000623221 587 ntBASIC16.47■□□□□ 0.23
PSEN1P49768 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PSEN1P49768 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.47■□□□□ 0.23
PSEN1P49768 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.47■□□□□ 0.23
PSEN1P49768 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSEN1P49768 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 VN1R11P-201ENST00000407795 868 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.46■□□□□ 0.23
PSEN1P49768 RN7SL692P-201ENST00000464677 288 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 CSNK1A1P3-201ENST00000504105 330 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 AC123567.1-201ENST00000548294 1261 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.46■□□□□ 0.23
PSEN1P49768 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 TMEM261P1-201ENST00000604899 340 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PSEN1P49768 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.46■□□□□ 0.23
PSEN1P49768 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSEN1P49768 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PSEN1P49768 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
PSEN1P49768 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PSEN1P49768 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PSEN1P49768 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PSEN1P49768 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PSEN1P49768 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PSEN1P49768 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSEN1P49768 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSEN1P49768 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms