Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.06□□□□□ -0.16
RFC3P40938 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
RFC3P40938 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 AL365203.3-201ENST00000609742 2057 ntBASIC14.06□□□□□ -0.16
RFC3P40938 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RFC3P40938 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.05□□□□□ -0.16
RFC3P40938 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 RPL7P3-201ENST00000441388 714 ntBASIC14.05□□□□□ -0.16
RFC3P40938 CSF2RBP1-201ENST00000447905 391 ntBASIC14.05□□□□□ -0.16
RFC3P40938 AC092658.1-201ENST00000505836 891 ntBASIC14.05□□□□□ -0.16
RFC3P40938 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.05□□□□□ -0.16
RFC3P40938 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.05□□□□□ -0.16
RFC3P40938 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.05□□□□□ -0.16
RFC3P40938 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.05□□□□□ -0.16
RFC3P40938 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.05□□□□□ -0.16
RFC3P40938 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.05□□□□□ -0.16
RFC3P40938 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 CICP14-201ENST00000629111 2732 ntBASIC14.05□□□□□ -0.16
RFC3P40938 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFC3P40938 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
RFC3P40938 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RFC3P40938 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 AC138035.3-201ENST00000622706 2791 ntBASIC14.04□□□□□ -0.16
RFC3P40938 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RFC3P40938 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RFC3P40938 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RFC3P40938 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RFC3P40938 C2orf27AP3-201ENST00000434123 579 ntBASIC14.04□□□□□ -0.16
RFC3P40938 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFC3P40938 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 AC022137.2-201ENST00000503482 481 ntBASIC14.04□□□□□ -0.16
RFC3P40938 GAPDHP40-201ENST00000505218 1006 ntBASIC14.04□□□□□ -0.16
RFC3P40938 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.04□□□□□ -0.16
RFC3P40938 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms