Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21■□□□□ 0.95
CPS1P31327 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC21■□□□□ 0.95
CPS1P31327 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC21■□□□□ 0.95
CPS1P31327 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC21■□□□□ 0.95
CPS1P31327 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21■□□□□ 0.95
CPS1P31327 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC21■□□□□ 0.95
CPS1P31327 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21■□□□□ 0.95
CPS1P31327 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21■□□□□ 0.95
CPS1P31327 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21■□□□□ 0.95
CPS1P31327 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 AL137783.1-201ENST00000623494 1896 ntBASIC21■□□□□ 0.95
CPS1P31327 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CPS1P31327 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.99■□□□□ 0.95
CPS1P31327 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CPS1P31327 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 DPY19L2P5-201ENST00000456300 331 ntBASIC20.99■□□□□ 0.95
CPS1P31327 AC114947.1-202ENST00000514136 344 ntBASIC20.99■□□□□ 0.95
CPS1P31327 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.99■□□□□ 0.95
CPS1P31327 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CPS1P31327 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.99■□□□□ 0.95
CPS1P31327 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 AC006548.2-201ENST00000605217 529 ntBASIC20.99■□□□□ 0.95
CPS1P31327 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.99■□□□□ 0.95
CPS1P31327 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPS1P31327 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CPS1P31327 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.99■□□□□ 0.95
CPS1P31327 AC105250.1-201ENST00000509378 2057 ntBASIC20.99■□□□□ 0.95
CPS1P31327 HLA-DMA-203ENST00000395305 777 ntBASIC20.99■□□□□ 0.95
CPS1P31327 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.99■□□□□ 0.95
CPS1P31327 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.99■□□□□ 0.95
CPS1P31327 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.99■□□□□ 0.95
CPS1P31327 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.98■□□□□ 0.95
CPS1P31327 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CPS1P31327 RNA5SP359-201ENST00000364838 113 ntBASIC20.98■□□□□ 0.95
CPS1P31327 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.98■□□□□ 0.95
CPS1P31327 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.98■□□□□ 0.95
CPS1P31327 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.98■□□□□ 0.95
CPS1P31327 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPS1P31327 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.98■□□□□ 0.95
CPS1P31327 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.97■□□□□ 0.95
CPS1P31327 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.97■□□□□ 0.95
CPS1P31327 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 AC020910.5-201ENST00000623668 1865 ntBASIC20.97■□□□□ 0.95
CPS1P31327 AC003102.2-201ENST00000589195 1469 ntBASIC20.97■□□□□ 0.95
CPS1P31327 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CPS1P31327 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.97■□□□□ 0.95
CPS1P31327 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CPS1P31327 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.97■□□□□ 0.95
CPS1P31327 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.97■□□□□ 0.95
CPS1P31327 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.97■□□□□ 0.95
CPS1P31327 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms