Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCD3P28288 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 MSTO2P-201ENST00000314835 1709 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ABCD3P28288 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
ABCD3P28288 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ABCD3P28288 AC067930.6-201ENST00000623257 4947 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 AL139094.1-201ENST00000405549 1188 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 BAATP1-201ENST00000412284 1225 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 KLF2P2-201ENST00000416807 1039 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 TMEM14DP-201ENST00000422205 345 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 AC114812.1-204ENST00000449669 728 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 KRT18P25-201ENST00000508931 1278 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.1□□□□□ -0.15
ABCD3P28288 AC068587.3-201ENST00000526613 355 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
ABCD3P28288 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.1□□□□□ -0.15
ABCD3P28288 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 AC144831.1-201ENST00000573312 2656 ntBASIC14.1□□□□□ -0.15
ABCD3P28288 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.1□□□□□ -0.15
ABCD3P28288 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ABCD3P28288 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 AC012441.1-201ENST00000446669 685 ntBASIC14.09□□□□□ -0.15
ABCD3P28288 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.09□□□□□ -0.15
ABCD3P28288 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.09□□□□□ -0.15
ABCD3P28288 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCD3P28288 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCD3P28288 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.09□□□□□ -0.15
ABCD3P28288 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
ABCD3P28288 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms