Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PTX3P26022 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PTX3P26022 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PTX3P26022 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PTX3P26022 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PTX3P26022 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PTX3P26022 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.71□□□□□ -0.06
PTX3P26022 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.71□□□□□ -0.06
PTX3P26022 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.71□□□□□ -0.06
PTX3P26022 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 AC005089.1-201ENST00000619486 2241 ntBASIC14.7□□□□□ -0.06
PTX3P26022 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.7□□□□□ -0.06
PTX3P26022 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 AC104596.2-201ENST00000512793 793 ntBASIC14.7□□□□□ -0.06
PTX3P26022 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.7□□□□□ -0.06
PTX3P26022 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PTX3P26022 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 AC099568.2-201ENST00000609194 695 ntBASIC14.7□□□□□ -0.06
PTX3P26022 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PTX3P26022 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PTX3P26022 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.7□□□□□ -0.06
PTX3P26022 LINC00528-201ENST00000600723 2160 ntBASIC14.7□□□□□ -0.06
PTX3P26022 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PTX3P26022 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 UGT1A2P-201ENST00000454886 866 ntBASIC14.69□□□□□ -0.06
PTX3P26022 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.69□□□□□ -0.06
PTX3P26022 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.69□□□□□ -0.06
PTX3P26022 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 AC055876.2-201ENST00000531834 546 ntBASIC14.69□□□□□ -0.06
PTX3P26022 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.69□□□□□ -0.06
PTX3P26022 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.69□□□□□ -0.06
PTX3P26022 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 AL049840.4-201ENST00000602422 811 ntBASIC14.69□□□□□ -0.06
PTX3P26022 AC093813.1-201ENST00000605066 256 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms