Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 AC244107.1-201ENST00000442033 332 ntBASIC12.86□□□□□ -0.35
LMO1P25800 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.86□□□□□ -0.35
LMO1P25800 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 RN7SL399P-201ENST00000471648 279 ntBASIC12.86□□□□□ -0.35
LMO1P25800 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.86□□□□□ -0.35
LMO1P25800 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.86□□□□□ -0.35
LMO1P25800 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.86□□□□□ -0.35
LMO1P25800 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.86□□□□□ -0.35
LMO1P25800 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LMO1P25800 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 DRD5P1-201ENST00000456605 1438 ntBASIC12.86□□□□□ -0.35
LMO1P25800 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.86□□□□□ -0.35
LMO1P25800 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LMO1P25800 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.86□□□□□ -0.35
LMO1P25800 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO1P25800 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 AL645937.2-201ENST00000396808 931 ntBASIC12.85□□□□□ -0.35
LMO1P25800 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.85□□□□□ -0.35
LMO1P25800 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 FAM86LP-201ENST00000478302 853 ntBASIC12.85□□□□□ -0.35
LMO1P25800 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 AC026410.3-201ENST00000514280 936 ntBASIC12.85□□□□□ -0.35
LMO1P25800 DOC2GP-202ENST00000514950 1163 ntBASIC12.85□□□□□ -0.35
LMO1P25800 RNA5SP421-201ENST00000516864 134 ntBASIC12.85□□□□□ -0.35
LMO1P25800 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.85□□□□□ -0.35
LMO1P25800 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO1P25800 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.85□□□□□ -0.35
LMO1P25800 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
LMO1P25800 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
LMO1P25800 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 AC036164.1-201ENST00000570544 333 ntBASIC12.85□□□□□ -0.35
LMO1P25800 AC005498.2-205ENST00000593218 784 ntBASIC12.85□□□□□ -0.35
LMO1P25800 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.85□□□□□ -0.35
LMO1P25800 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.85□□□□□ -0.35
LMO1P25800 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.85□□□□□ -0.35
LMO1P25800 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.85□□□□□ -0.35
LMO1P25800 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms