Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CCND1P24385 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 FO393414.2-201ENST00000405153 598 ntBASIC15.49■□□□□ 0.07
CCND1P24385 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.49■□□□□ 0.07
CCND1P24385 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.49■□□□□ 0.07
CCND1P24385 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 AC109322.1-201ENST00000524499 1264 ntBASIC15.49■□□□□ 0.07
CCND1P24385 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.49■□□□□ 0.07
CCND1P24385 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 BANF1P1-201ENST00000553684 263 ntBASIC15.49■□□□□ 0.07
CCND1P24385 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.49■□□□□ 0.07
CCND1P24385 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.49■□□□□ 0.07
CCND1P24385 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.49■□□□□ 0.07
CCND1P24385 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 AC006538.3-201ENST00000612495 578 ntBASIC15.49■□□□□ 0.07
CCND1P24385 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.49■□□□□ 0.07
CCND1P24385 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCND1P24385 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 AC092135.3-201ENST00000624151 1846 ntBASIC15.49■□□□□ 0.07
CCND1P24385 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCND1P24385 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CCND1P24385 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCND1P24385 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCND1P24385 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CCND1P24385 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 AC067750.1-201ENST00000608826 6545 ntBASIC15.48■□□□□ 0.07
CCND1P24385 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.48■□□□□ 0.07
CCND1P24385 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.48■□□□□ 0.07
CCND1P24385 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.48■□□□□ 0.07
CCND1P24385 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.48■□□□□ 0.07
CCND1P24385 AL450472.2-201ENST00000603663 1156 ntBASIC15.48■□□□□ 0.07
CCND1P24385 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 GPALPP1-207ENST00000611650 899 ntBASIC15.48■□□□□ 0.07
CCND1P24385 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CCND1P24385 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.48■□□□□ 0.07
CCND1P24385 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCND1P24385 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.48■□□□□ 0.07
CCND1P24385 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCND1P24385 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CCND1P24385 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms