Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP8P22894 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP8P22894 TERF1P3-201ENST00000505638 1227 ntBASIC16.05■□□□□ 0.16
MMP8P22894 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP8P22894 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP8P22894 ENPP7P5-201ENST00000541031 1031 ntBASIC16.05■□□□□ 0.16
MMP8P22894 DUX4L47-201ENST00000566374 394 ntBASIC16.05■□□□□ 0.16
MMP8P22894 AC140912.1-201ENST00000577171 1054 ntBASIC16.05■□□□□ 0.16
MMP8P22894 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
MMP8P22894 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP8P22894 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MMP8P22894 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MMP8P22894 AC023090.2-201ENST00000625182 2110 ntBASIC16.04■□□□□ 0.16
MMP8P22894 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP8P22894 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 NORAD-201ENST00000565493 5339 ntBASIC16.04■□□□□ 0.16
MMP8P22894 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP8P22894 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 RNU1-114P-201ENST00000365297 166 ntBASIC16.04■□□□□ 0.16
MMP8P22894 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP8P22894 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
MMP8P22894 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP8P22894 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 AC114812.1-204ENST00000449669 728 ntBASIC16.04■□□□□ 0.16
MMP8P22894 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
MMP8P22894 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP8P22894 WASH4P-201ENST00000564273 1246 ntBASIC16.04■□□□□ 0.16
MMP8P22894 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP8P22894 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 WFDC1-204ENST00000613603 549 ntBASIC16.04■□□□□ 0.16
MMP8P22894 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MMP8P22894 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MMP8P22894 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP8P22894 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP8P22894 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP8P22894 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
MMP8P22894 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 MTHFR-210ENST00000641407 2387 ntBASIC16.03■□□□□ 0.16
MMP8P22894 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MMP8P22894 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MMP8P22894 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP8P22894 TP53TG3HP-202ENST00000569755 579 ntBASIC16.03■□□□□ 0.16
MMP8P22894 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MMP8P22894 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.03■□□□□ 0.16
MMP8P22894 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP8P22894 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MMP8P22894 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP8P22894 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP8P22894 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms