Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 NORAD-201ENST00000565493 5339 ntBASIC17.72■□□□□ 0.43
ERCC3P19447 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC3P19447 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 BTBD6P1-201ENST00000412176 1267 ntBASIC17.71■□□□□ 0.43
ERCC3P19447 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC3P19447 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.71■□□□□ 0.43
ERCC3P19447 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC3P19447 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 AL591846.1-201ENST00000451736 433 ntBASIC17.71■□□□□ 0.43
ERCC3P19447 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC3P19447 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.71■□□□□ 0.43
ERCC3P19447 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC3P19447 AP001258.2-201ENST00000529891 490 ntBASIC17.71■□□□□ 0.43
ERCC3P19447 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC3P19447 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC3P19447 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC3P19447 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
ERCC3P19447 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC3P19447 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC3P19447 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 AC073347.1-201ENST00000421633 2643 ntBASIC17.7■□□□□ 0.42
ERCC3P19447 AC023824.1-201ENST00000562945 2975 ntBASIC17.7■□□□□ 0.42
ERCC3P19447 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC3P19447 AC114812.1-204ENST00000449669 728 ntBASIC17.7■□□□□ 0.42
ERCC3P19447 HOMER2P2-201ENST00000451621 847 ntBASIC17.7■□□□□ 0.42
ERCC3P19447 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC3P19447 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.7■□□□□ 0.42
ERCC3P19447 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 ECM1P1-201ENST00000604092 1279 ntBASIC17.7■□□□□ 0.42
ERCC3P19447 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC3P19447 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.7■□□□□ 0.42
ERCC3P19447 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC3P19447 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC3P19447 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC3P19447 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC3P19447 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC3P19447 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC3P19447 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.69■□□□□ 0.42
ERCC3P19447 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC3P19447 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms