Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 AC093004.1-201ENST00000508850 424 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SAMD11P1-201ENST00000571429 661 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 RN7SL204P-201ENST00000582831 262 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 LINC02560-201ENST00000596379 459 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 AC012508.2-201ENST00000567613 1472 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 AC007541.1-201ENST00000570282 1469 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AL157414.3-201ENST00000624276 1954 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC236430.1-201ENST00000402231 743 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC098850.1-201ENST00000419919 790 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 MEP1AP4-201ENST00000423244 1087 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC055876.2-201ENST00000531834 546 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC011467.4-201ENST00000594891 528 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AL132655.2-201ENST00000596276 594 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 CHCHD2P3-201ENST00000603038 451 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC107373.2-201ENST00000607735 490 ntBASIC13.73□□□□□ -0.21
HLA-DOBP13765 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DOBP13765 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DOBP13765 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms