Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC055876.3-201ENST00000431496 288 ntBASIC14.99□□□□□ -0.01
PCNAP12004 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.99□□□□□ -0.01
PCNAP12004 AL512638.1-201ENST00000457493 794 ntBASIC14.99□□□□□ -0.01
PCNAP12004 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.99□□□□□ -0.01
PCNAP12004 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.99□□□□□ -0.01
PCNAP12004 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PCNAP12004 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.99□□□□□ -0.01
PCNAP12004 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.99□□□□□ -0.01
PCNAP12004 AC138649.4-201ENST00000612222 287 ntBASIC14.99□□□□□ -0.01
PCNAP12004 AC004461.2-201ENST00000629517 803 ntBASIC14.99□□□□□ -0.01
PCNAP12004 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.99□□□□□ -0.01
PCNAP12004 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.99□□□□□ -0.01
PCNAP12004 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PCNAP12004 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
PCNAP12004 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
PCNAP12004 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCNAP12004 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 AC005089.1-201ENST00000619486 2241 ntBASIC14.98□□□□□ -0.01
PCNAP12004 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.98□□□□□ -0.01
PCNAP12004 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.98□□□□□ -0.01
PCNAP12004 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.98□□□□□ -0.01
PCNAP12004 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.98□□□□□ -0.01
PCNAP12004 AC117489.1-201ENST00000625169 3217 ntBASIC14.98□□□□□ -0.01
PCNAP12004 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
PCNAP12004 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCNAP12004 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCNAP12004 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.98□□□□□ -0.01
PCNAP12004 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 AL121723.1-201ENST00000445194 1519 ntBASIC14.97□□□□□ -0.01
PCNAP12004 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 LINC00528-201ENST00000600723 2160 ntBASIC14.97□□□□□ -0.01
PCNAP12004 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 AL133267.1-201ENST00000398220 340 ntBASIC14.97□□□□□ -0.01
PCNAP12004 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TSSK5P-201ENST00000423978 907 ntBASIC14.97□□□□□ -0.01
PCNAP12004 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms