Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 RPL13AP20-201ENST00000459725 609 ntBASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AC108725.1-201ENST00000495472 409 ntBASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 KRT8P44-201ENST00000441609 1350 ntBASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 AL133338.1-201ENST00000565695 1517 ntBASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 AL139094.1-201ENST00000405549 1188 ntBASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 AC084364.1-201ENST00000551967 1556 ntBASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 AC007787.1-201ENST00000588095 1583 ntBASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RAB40ALP0C0E4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 TPM3P8-201ENST00000330554 643 ntBASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 RPL5P21-201ENST00000404620 815 ntBASIC14.41□□□□□ -0.1
RAB40ALP0C0E4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms