Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SNX18-202ENST00000343017 3140 ntBASIC16.77■□□□□ 0.28
CLTAP09496 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLTAP09496 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLTAP09496 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLTAP09496 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.77■□□□□ 0.28
CLTAP09496 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.77■□□□□ 0.28
CLTAP09496 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLTAP09496 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.77■□□□□ 0.28
CLTAP09496 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.77■□□□□ 0.28
CLTAP09496 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.77■□□□□ 0.28
CLTAP09496 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.77■□□□□ 0.28
CLTAP09496 AP001582.1-201ENST00000525856 295 ntBASIC16.77■□□□□ 0.28
CLTAP09496 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLTAP09496 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.77■□□□□ 0.28
CLTAP09496 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.77■□□□□ 0.28
CLTAP09496 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.77■□□□□ 0.28
CLTAP09496 AC008735.3-201ENST00000596646 500 ntBASIC16.77■□□□□ 0.28
CLTAP09496 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLTAP09496 AC006058.4-201ENST00000624016 1670 ntBASIC16.77■□□□□ 0.28
CLTAP09496 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.77■□□□□ 0.27
CLTAP09496 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.77■□□□□ 0.27
CLTAP09496 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 FAM45BP-202ENST00000592932 1624 ntBASIC16.77■□□□□ 0.27
CLTAP09496 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLTAP09496 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.77■□□□□ 0.27
CLTAP09496 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.77■□□□□ 0.27
CLTAP09496 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLTAP09496 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.77■□□□□ 0.27
CLTAP09496 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLTAP09496 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLTAP09496 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 TMEM14DP-201ENST00000422205 345 ntBASIC16.76■□□□□ 0.27
CLTAP09496 U91328.1-201ENST00000437528 223 ntBASIC16.76■□□□□ 0.27
CLTAP09496 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.76■□□□□ 0.27
CLTAP09496 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 AC093433.1-201ENST00000458048 571 ntBASIC16.76■□□□□ 0.27
CLTAP09496 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.76■□□□□ 0.27
CLTAP09496 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 PTP4A1P2-201ENST00000546033 454 ntBASIC16.76■□□□□ 0.27
CLTAP09496 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 AC106886.1-201ENST00000568660 600 ntBASIC16.76■□□□□ 0.27
CLTAP09496 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 BX539320.1-201ENST00000623759 877 ntBASIC16.76■□□□□ 0.27
CLTAP09496 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLTAP09496 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.76■□□□□ 0.27
CLTAP09496 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.76■□□□□ 0.27
CLTAP09496 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLTAP09496 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms