Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TPM1P09493 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM1P09493 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TPM1P09493 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TPM1P09493 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM1P09493 AC136759.1-202ENST00000530858 2194 ntBASIC16.94■□□□□ 0.3
TPM1P09493 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TPM1P09493 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TPM1P09493 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.93■□□□□ 0.3
TPM1P09493 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 KRT18P3-201ENST00000451602 1288 ntBASIC16.93■□□□□ 0.3
TPM1P09493 TIMM8BP1-201ENST00000452384 211 ntBASIC16.93■□□□□ 0.3
TPM1P09493 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.93■□□□□ 0.3
TPM1P09493 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.93■□□□□ 0.3
TPM1P09493 LINC01225-203ENST00000563550 1244 ntBASIC16.93■□□□□ 0.3
TPM1P09493 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 AC027601.4-201ENST00000611259 610 ntBASIC16.93■□□□□ 0.3
TPM1P09493 AC092902.6-201ENST00000641783 218 ntBASIC16.93■□□□□ 0.3
TPM1P09493 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.93■□□□□ 0.3
TPM1P09493 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.93■□□□□ 0.3
TPM1P09493 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPM1P09493 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 ADH5P3-201ENST00000433842 1137 ntBASIC16.92■□□□□ 0.3
TPM1P09493 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM1P09493 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM1P09493 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 AC055717.3-201ENST00000622967 595 ntBASIC16.92■□□□□ 0.3
TPM1P09493 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TPM1P09493 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
TPM1P09493 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM1P09493 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM1P09493 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms