Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL5A2P05997 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.59■□□□□ 0.73
COL5A2P05997 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 AL590440.2-201ENST00000641973 1595 ntBASIC19.59■□□□□ 0.73
COL5A2P05997 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL5A2P05997 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL5A2P05997 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.59■□□□□ 0.73
COL5A2P05997 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL5A2P05997 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
COL5A2P05997 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL5A2P05997 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.59■□□□□ 0.73
COL5A2P05997 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.59■□□□□ 0.73
COL5A2P05997 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.59■□□□□ 0.73
COL5A2P05997 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.59■□□□□ 0.73
COL5A2P05997 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.59■□□□□ 0.73
COL5A2P05997 AP001184.1-201ENST00000637936 376 ntBASIC19.59■□□□□ 0.73
COL5A2P05997 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.59■□□□□ 0.73
COL5A2P05997 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL5A2P05997 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
COL5A2P05997 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.58■□□□□ 0.73
COL5A2P05997 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.58■□□□□ 0.73
COL5A2P05997 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COL5A2P05997 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COL5A2P05997 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL5A2P05997 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COL5A2P05997 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.58■□□□□ 0.72
COL5A2P05997 IDS-203ENST00000428056 1213 ntTSL 2 BASIC19.58■□□□□ 0.72
COL5A2P05997 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.58■□□□□ 0.72
COL5A2P05997 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.58■□□□□ 0.72
COL5A2P05997 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COL5A2P05997 REXO1L2P-201ENST00000425429 2069 ntBASIC19.58■□□□□ 0.72
COL5A2P05997 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
COL5A2P05997 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL5A2P05997 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.58■□□□□ 0.72
COL5A2P05997 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL5A2P05997 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.57■□□□□ 0.72
COL5A2P05997 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
COL5A2P05997 AC079328.2-201ENST00000561241 3354 ntBASIC19.57■□□□□ 0.72
COL5A2P05997 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 AHCYP4-201ENST00000419201 1315 ntBASIC19.57■□□□□ 0.72
COL5A2P05997 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.57■□□□□ 0.72
COL5A2P05997 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC19.57■□□□□ 0.72
COL5A2P05997 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.57■□□□□ 0.72
COL5A2P05997 ALG1L6P-201ENST00000515248 758 ntBASIC19.57■□□□□ 0.72
COL5A2P05997 AP000911.2-201ENST00000534330 502 ntBASIC19.57■□□□□ 0.72
COL5A2P05997 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
COL5A2P05997 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.57■□□□□ 0.72
COL5A2P05997 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.57■□□□□ 0.72
COL5A2P05997 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL5A2P05997 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.57■□□□□ 0.72
COL5A2P05997 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.57■□□□□ 0.72
COL5A2P05997 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL5A2P05997 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL5A2P05997 Z69890.1-201ENST00000382990 339 ntBASIC19.56■□□□□ 0.72
COL5A2P05997 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms