Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 IGHV3-22-201ENST00000520721 359 ntBASIC12.89□□□□□ -0.35
CD74P04233 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.89□□□□□ -0.35
CD74P04233 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 PDPK2P-202ENST00000562415 1191 ntBASIC12.89□□□□□ -0.35
CD74P04233 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 AC018845.2-201ENST00000568326 409 ntBASIC12.89□□□□□ -0.35
CD74P04233 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.89□□□□□ -0.35
CD74P04233 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.89□□□□□ -0.35
CD74P04233 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.89□□□□□ -0.35
CD74P04233 AC116407.3-201ENST00000623905 1129 ntBASIC12.89□□□□□ -0.35
CD74P04233 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 AC067750.1-201ENST00000608826 6545 ntBASIC12.89□□□□□ -0.35
CD74P04233 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CD74P04233 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 KRT8P24-201ENST00000560290 1559 ntBASIC12.89□□□□□ -0.35
CD74P04233 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CD74P04233 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 AC015818.8-201ENST00000587907 1519 ntBASIC12.88□□□□□ -0.35
CD74P04233 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD74P04233 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CD74P04233 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 AL133267.1-201ENST00000398220 340 ntBASIC12.88□□□□□ -0.35
CD74P04233 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 TFAMP1-201ENST00000412727 736 ntBASIC12.88□□□□□ -0.35
CD74P04233 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.88□□□□□ -0.35
CD74P04233 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.88□□□□□ -0.35
CD74P04233 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.88□□□□□ -0.35
CD74P04233 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.88□□□□□ -0.35
CD74P04233 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CD74P04233 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 AL773604.1-201ENST00000617417 272 ntBASIC12.88□□□□□ -0.35
CD74P04233 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD74P04233 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD74P04233 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CD74P04233 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.88□□□□□ -0.35
CD74P04233 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD74P04233 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CD74P04233 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 AC105206.1-202ENST00000314927 2368 ntBASIC12.87□□□□□ -0.35
CD74P04233 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms